PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04092.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 315aa    MW: 35106.9 Da    PI: 6.5496
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04092.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.91.2e-29134192259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK+ ++++ pr+YY+C++a  Cpvkkkv+rsa+dp++v+ tYeg+H h+
  PIN04092.1 134 RDGYQWRKYGQKVTRDNPSPRAYYKCSFApACPVKKKVQRSANDPSIVVATYEGHHLHH 192
                 7***************************99**************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDKSLAGSSP LAIDLNSNPI HNLTEIPDFV HGKESLPKDE LHELIQELNQ VKSQNKRLTD  60
MLNIVHKDYE YIRQNSSGET RKRKAEEDIQ NVGHFLEHNP SDRSCCHEWP KVVKSNISRS  120
YVRVDPSDVS LVVRDGYQWR KYGQKVTRDN PSPRAYYKCS FAPACPVKKK VQRSANDPSI  180
VVATYEGHHL HHLDDNHHHH DDNHHHHPPP ADISSGAPPE AARAPSSCQI SVDCSGSTAS  240
LDLSDPLTWT KIQKAIATTE NGEIQQILVE QLASSLSRNR GFTAALAAAI SSRILDDVPE  300
NDDDDIVSNS KGFSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.21e-47WRKY family protein