PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04138.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 197aa MW: 22610.2 Da PI: 5.6194

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	69.2	1.1e-21	12	157	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpk........kvkaeekewyfFskrdkkya.......tgkrknratk..s 80 lp G+rF Ptd el ++yL+kkv+++++ +++ i+ + y++ P+ + ++++e +e+ + +d+ + ++++k r++ PIN04138.1 12 LPIGYRFAPTDLELATFYLQKKVSSRPVVGDDIkeIDAHEFYSHSPEAIGIyrsqdhdlTTEQEGEEVPM-IGKDRIEMneefhkqEENQKIRIVGdgI 109 699**********************6664322366667999999999633566666523333334322.2222222211221113345555444447 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gyW+++gk++ ++++ g++ k +v+++g+ ++g++t+W ++ey+l PIN04138.1 110 GYWRSSGKKEVIYDAMGRAYAFKIHFVYFSGSPNRGKQTHWRLEEYHL 157 99******************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MSFGDGICPI ELPIGYRFAP TDLELATFYL QKKVSSRPVV GDDIKEIDAH EFYSHSPEAI 60 GIYRSQDHDL TTEQEGEEVP MIGKDRIEMN EEFHKQEENQ KIRIVGDGIG YWRSSGKKEV 120 IYDAMGRAYA FKIHFVYFSG SPNRGKQTHW RLEEYHLITS DRSCDDGGRG GGETRNSKID 180 DWVLGRITRG RNYASFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	2e-15	NAC family protein