PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04145.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 199aa    MW: 23093 Da    PI: 8.4805
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04145.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.82.1e-191366356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +R +f+++q++ Le+ Fe +  p  + +++LA+klgL+ rqV +WFqN+Ra+ k
  PIN04145.1 13 NRKRFSDDQIKSLETTFETEARPELRLKQHLANKLGLQPRQVAIWFQNKRARSK 66
                799*************************************************99 PP
2HD-ZIP_I/II105.25.2e-3413104293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  +++r+s++q+k+LE++Fe+e + e + K++la++Lglqprqva+WFqn+RAR k+kq+E++y+ Lk++yd+l+ + e+L+ke+++L  ++++
   PIN04145.1  13 NRKRFSDDQIKSLETTFETEARPELRLKQHLANKLGLQPRQVAIWFQNKRARSKSKQMEREYSILKSNYDKLALQFEALRKENQTLLIQVQR 104
                  689***********************************************************************************988875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MSTSIKKASK NNNRKRFSDD QIKSLETTFE TEARPELRLK QHLANKLGLQ PRQVAIWFQN  60
KRARSKSKQM EREYSILKSN YDKLALQFEA LRKENQTLLI QVQRLRKMAD KIDGEQNDNK  120
NHIKLATSEN PRFLVDINSH ELCIPNDISR KADFLEEEAD VLNMVQLAEG SLASPENGCS  180
FDSCTFLDNT SNSPQWWDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.11e-43HD-ZIP family protein