PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04171.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 228aa    MW: 25304.5 Da    PI: 4.3997
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.2e-151475147
                     TSSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg................tWktIartmgkgRtlkqcksrwqky 47
                     +g+WT++Ed +l+  +   G                   W++Ia++++ gRt++++k++w+++
       PIN04171.1 14 KGPWTADEDRKLISFILANGQCcwrtlpklaetliyvmMWSKIASHLP-GRTDNEIKNHWNTH 75
                     79******************99**************************.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MGRQPCCEKV GLKKGPWTAD EDRKLISFIL ANGQCCWRTL PKLAETLIYV MMWSKIASHL  60
PGRTDNEIKN HWNTHIKKKL KKMGIDPVTH KPLLPPTTDQ PPPEVAAEEL ELAADTTSLH  120
QSTTEESAKD KITSPVGPID LLVNNIDDFC IDEVPVIEPH EILLDSDNNS STPSSSSSSS  180
SSNLSSCTSN GLEDLQLSPT FDEYYSEIMN SNIWDDDFCN SLDLFGLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.13e-51MYB family protein