PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04197.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 340aa    MW: 37642.8 Da    PI: 10.6108
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.34.2e-25266325359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 D+y+WrKYG +e+kgs++pr YY+C +    +Cp++k ver+ +dp+++ ++YegeH+h+
  PIN04197.1 266 DQYSWRKYGEREIKGSPYPRCYYKCRMMkdwTCPARKYVERDIDDPRMLFVIYEGEHRHN 325
                 9************************9988899***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MSGFSKLNET MAVQEAADAG LNSMARLIEA FSHQQPPPCQ NQKPDCREIA NFTVSKFKRV  60
ISLLDRTGHA RFRRGPVQPR PYSPALGRVQ HHNPPLSLFS PPASAAAIPY GLIQPQNPAS  120
KIYRPQPQSL RSLSPASTTA QAPAAAQPLT FGSNKPSAPF KKYGSASAAG TTSENKSSKT  180
FRSSVTGERS VSNRRGRLPI MCAGLSVQPL SVSKPPLPGR RSREDDRSDA VHGQTSGSRP  240
CKSKRRVRKI IKVPAISSNN KDIPPDQYSW RKYGEREIKG SPYPRCYYKC RMMKDWTCPA  300
RKYVERDIDD PRMLFVIYEG EHRHNQAAGA DDLDPMVVID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.22e-62WRKY family protein