PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04240.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 135aa    MW: 14690 Da    PI: 10.6969
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA65.27e-212053134
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                Cs C+ttkTplWR+gp+g+k+LCnaCG++yrkk+
  PIN04240.1 20 CSDCKTTKTPLWRSGPSGPKSLCNACGIRYRKKR 53
                ********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MESGQKEESL SSEVEITKSC SDCKTTKTPL WRSGPSGPKS LCNACGIRYR KKRPTTAAAS  60
TPDGKNDGKK GKIGKTRSLK IRDALKVNLR PLGKEVEVME GQRSPAKRLR SPRQWGEVER  120
AALLLMALSC GAVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-20GATA family protein