PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04252.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 167aa    MW: 19149.9 Da    PI: 4.5913
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.6e-0919422448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Ia++++ gRt++++k++w+ yl
       PIN04252.1 19 WSAIAAKLP-GRTDNEIKNHWHAYL 42
                     *********.***********9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MYFQNVTKED FDFKRFPWWS AIAAKLPGRT DNEIKNHWHA YLNKRTTKRT PKSENFQGEK  60
SCSVVTHLEK TEKSEVPSSL SSVDLSSSAE ENCCPGSNSS SFNLGVYDHS ASPSLDPFSG  120
FQESFWTEPF VLDKSDSNID FYNYLLLDED GFFSPNFSSF QYDAINW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.27e-11MYB_related family protein