PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04254.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NF-YC

Protein Properties

Length: 275aa MW: 31353.5 Da PI: 6.573

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	117.8	5.2e-37	54	156	2	99
NF-YC 2 lksfwekq....iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 ++sfw+++ e ++d++ +h lPlarikk++k++e+vkm+sa++ vl++kace+f++eltlr+w++++e++rrtl++ d+a+a+ d fl di PIN04254.1 54 MQSFWKERlteiCEASSDVHgQHVLPLARIKKVIKSNEQVKMVSADTSVLFAKACEIFVMELTLRAWMRTQESNRRTLQRDDVASAIRDDDLLVFLKDI 152 89***998887899999989***************************************************************************** PP NF-YC 96 vprd 99 +p + PIN04254.1 153 IPMK 156 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MGTNQPIQFS STSRPPLHMH DFMPIPSATI TLHDNHERED IRNSQFTNQM RQNMQSFWKE 60 RLTEICEASS DVHGQHVLPL ARIKKVIKSN EQVKMVSADT SVLFAKACEI FVMELTLRAW 120 MRTQESNRRT LQRDDVASAI RDDDLLVFLK DIIPMKIHQE APLSLANHLG GYVPFTEPNI 180 SSYSTYAMNM QNTNKGEVAS NDHSMVVDHR STFPVNLHYN ITHTYSQINQ EMQHVSVFSP 240 PPPPLAAAAE SELWSPPLPP APTNADNPYF NFKVW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	6e-34	NF-YC family protein