PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04320.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family BBR-BPC
Protein Properties Length: 323aa    MW: 36121.1 Da    PI: 10.0675
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind389.74.4e-11913231301
   GAGA_bind   1 mdddgsre..rnkg.yye...pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla 92 
                 mdd+g+re  r+k+ + +   ++ +s+     +q+m+++aerda+i+ernla+sekkaa+aerdma lqrd+a+aern+a++erdn+++al+++en+++
  PIN04320.1   1 MDDSGHREngRHKPpQGQwlmQHqPSM-----KQIMAIMAERDAAIQERNLAISEKKAALAERDMAILQRDSAIAERNNAIMERDNAIAALQFRENAMN 94 
                 999999877888773222223223444.....4****************************************************************99 PP

   GAGA_bind  93 ....salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185
                     s +p+g+q+ +g+k++++ q  +++ p++ +++++ r+++++++ p++  a+e  ++++      ak++ke+k+  + kk++ks kkvk+e++d 
  PIN04320.1  95 ngnmSPCPPGCQIPRGVKHMHHPQShVHHqPHMIETPYNNRDMQMTDTVPVSPIAPEPAKSRR------AKRAKEPKQATPSKKTSKSSKKVKREGDDL 187
                 998889*****************996444699************9999999887776555544......445555566666666666667777777663 PP

   GAGA_bind 186 r....................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqga 264
                 +                    sk ++k++dl+ln+v++Dest+PvPvCsCtG+lr CYkWGnGGWqS+CCtt++S+yPLP+++++r+aR++grKmS++a
  PIN04320.1 188 NktmfgksqewksgpdnelgvSKPDWKDQDLGLNQVAFDESTMPVPVCSCTGVLRPCYKWGNGGWQSSCCTTNLSMYPLPAVPNKRHARVGGRKMSGSA 286
                 3467777888999************************************************************************************** PP

   GAGA_bind 265 fkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 f+klL++LaaeG+dlsn+vDLk+hWAkHGtn+++ti+
  PIN04320.1 287 FNKLLSRLAAEGHDLSNAVDLKEHWAKHGTNRYITIK 323
                 ************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDDSGHRENG RHKPPQGQWL MQHQPSMKQI MAIMAERDAA IQERNLAISE KKAALAERDM  60
AILQRDSAIA ERNNAIMERD NAIAALQFRE NAMNNGNMSP CPPGCQIPRG VKHMHHPQSH  120
VHHQPHMIET PYNNRDMQMT DTVPVSPIAP EPAKSRRAKR AKEPKQATPS KKTSKSSKKV  180
KREGDDLNKT MFGKSQEWKS GPDNELGVSK PDWKDQDLGL NQVAFDESTM PVPVCSCTGV  240
LRPCYKWGNG GWQSSCCTTN LSMYPLPAVP NKRHARVGGR KMSGSAFNKL LSRLAAEGHD  300
LSNAVDLKEH WAKHGTNRYI TIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-149BBR-BPC family protein