PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04363.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WOX

Protein Properties

Length: 241aa MW: 27455.9 Da PI: 9.5605

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.8	1.4e-21	98	157	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l+++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ PIN04363.1 98 TRWNPTQEQIGILEMLYKSgMRTPNAQQIEQITAQLskygKIEGKNVFYWFQNHKARERQ 157 7***************99************************************97 PP
2	Wus_type_Homeobox	120.8	5.5e-39	98	159	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+lyksG+rtPn+++i++ita+L++yGkie+kNVfyWFQN+kaRerqkq PIN04363.1 98 TRWNPTQEQIGILEMLYKSGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQ 159 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MEIQLGMKVH QFTRGFWDHE PPSLSLGCKR LRPLVPKLTT TVAPDSFATS ATTTTTTATT 60 PGFDLKSFIR PESGPRKIGS SDYQKKESPQ VEAQPGGTRW NPTQEQIGIL EMLYKSGMRT 120 PNAQQIEQIT AQLSKYGKIE GKNVFYWFQN HKARERQKQK RNSLGLSHSP RRPPSPFSSA 180 TSLFLSTTKG EELLDNNPYK RKCMSWGFEV NNRYCTEEEE EEEEGQDRTL KLFPLHPEGR 240 S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	9e-68	WOX family protein