PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04424.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family G2-like
Protein Properties Length: 249aa    MW: 27499.8 Da    PI: 7.2175
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.73.1e-344195155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  PIN04424.1 41 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLRLMKVEGLTIYHVKSHLQKYRT 95
                79****************************************************8 PP
2Myb_DNA-binding58.12e-184394148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT+e++e +v+av++lGg    t+k + r m  +g+t +++ks++qky+
       PIN04424.1 43 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLRLMKvEGLTIYHVKSHLQKYR 94
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MFRQSTSTSV QPHISQQLPA TPGETCNAVV QSSSTSSAPA KQRMRWTPEL HEAFVEAVNK  60
LGGSERATPK GVLRLMKVEG LTIYHVKSHL QKYRTARYKP ETTEESSEKK TTSIDELSSL  120
DLKTGIEITE ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG RYLQMMFEKQ CKSGADLLKG  180
APSTSENPFK DLSDAVQNSP TKDNSRVEAG NSSTGGDLAD LPAGSGEHSA EDPNGKVESP  240
PSKRAKVHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.17e-72G2-like family protein