PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04541.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 551aa MW: 61534.6 Da PI: 4.5201

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.3	1.5e-53	20	146	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 pGfrFhPtdeelv +yL++kv gk +++ ++i+e+diyk+ePwdLp +k+k+++ ewyfFs+ dkky +g r+nrat++gyWk+tg+d++v++ k++ PIN04541.1 20 GPGFRFHPTDEELVRYYLRRKVCGKAIRF-DAISEIDIYKAEPWDLPcmSKLKTRDLEWYFFSELDKKYGNGARTNRATEKGYWKTTGRDRAVYH-KTQ 116 59************************9.99***********6347777888**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLv+++gr pkg++t+Wvmheyrl PIN04541.1 117 IVGMKKTLVYHSGRPPKGQRTNWVMHEYRL 146 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MSMKLKMVNK KSSISSSMLG PGFRFHPTDE ELVRYYLRRK VCGKAIRFDA ISEIDIYKAE 60 PWDLPCMSKL KTRDLEWYFF SELDKKYGNG ARTNRATEKG YWKTTGRDRA VYHKTQIVGM 120 KKTLVYHSGR PPKGQRTNWV MHEYRLTDLE LENAGVVQDA FVLCRVFQKS GSGPKNGEQY 180 GAPFVEEEWE DDDLELVTED EATGEVDFGG DAWFNSHNLQ KALGSDVPLD TAPFPSNFQC 240 ADGNYIEETT DSFNDMRRLL VHADQQNSDP EQCDDKNISN SPASYDMVVK PVEEEHNGEC 300 SKSVTSKDID YVVDESFLDS LDNFQYCDEG FLEANDLSNP IETNASAIDM LEEYLALSNA 360 NDDSSLFFAC DSAMAPGSED LVSDQALIPQ KELRKGTLQA TSPSGLLIDN NNKDAASMSA 420 KQESAKYQSD IQYPYIKKAS QMLGNIPAPP AFAAEFPSKD VTAGMIQIRN SSTGGNGTDR 480 SSNKHENFNI VLLFGFSLGN DGSSSLESSV SILQGKSLST VFRGWFYFIL LWVLVLSMSF 540 KVGTYVLQSS I

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MSMKLKMVNK KSSISSSMLG PGFRFHPTDE ELVRYYLRRK VCGKAIRFDA ISEIDIYKAE  60
PWDLPCMSKL KTRDLEWYFF SELDKKYGNG ARTNRATEKG YWKTTGRDRA VYHKTQIVGM  120
KKTLVYHSGR PPKGQRTNWV MHEYRLTDLE LENAGVVQDA FVLCRVFQKS GSGPKNGEQY  180
GAPFVEEEWE DDDLELVTED EATGEVDFGG DAWFNSHNLQ KALGSDVPLD TAPFPSNFQC  240
ADGNYIEETT DSFNDMRRLL VHADQQNSDP EQCDDKNISN SPASYDMVVK PVEEEHNGEC  300
SKSVTSKDID YVVDESFLDS LDNFQYCDEG FLEANDLSNP IETNASAIDM LEEYLALSNA  360
NDDSSLFFAC DSAMAPGSED LVSDQALIPQ KELRKGTLQA TSPSGLLIDN NNKDAASMSA  420
KQESAKYQSD IQYPYIKKAS QMLGNIPAPP AFAAEFPSKD VTAGMIQIRN SSTGGNGTDR  480
SSNKHENFNI VLLFGFSLGN DGSSSLESSV SILQGKSLST VFRGWFYFIL LWVLVLSMSF  540
KVGTYVLQSS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-112	NAC family protein