PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04544.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NF-YB

Protein Properties

Length: 192aa MW: 21302.4 Da PI: 6.3527

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04544.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	177.6	1.2e-55	33	126	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 vreqdrflPian++rimkk+lPanaki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+y++plk+yl++yre+ PIN04544.1 33 VREQDRFLPIANIGRIMKKALPANAKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIAPLKAYLARYREVS 126 69******************************************************************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MADSPGGHGG AGGSGSHENG GDGGGDQSPQ SNVREQDRFL PIANIGRIMK KALPANAKIA 60 KDAKDTVQEC VSEFISFVTS EASDKCQKEK RKTINGDDLL WAMATLGFEE YIAPLKAYLA 120 RYREVSELPL LFPVSIYISF LYEPFGHYLS FKLILAGFPD YTKMIFHFHL TLLFFLAPWM 180 ILWNNFDAAV RG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.3	2e-58	NF-YB family protein