PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04701.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 262aa    MW: 29537.9 Da    PI: 6.8829
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04701.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.5e-08150197455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  PIN04701.1 150 SHSLAERARRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 197
                 8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MADNFSQNFK QSFSLEDIDP NFEFMNQFSG LNPVHQDTYG LNFLIDSFSP QSSFPGLFTH  60
EDNSVMPSFT EPIISNENDQ KNRKRKGMDV NTPESSSANS SVYSSHQSSE NGIGKTNRGR  120
GKKVKGNEKE DEKPREVVHV RARRGQATDS HSLAERARRG KINERLRCLQ DIVPGCYKTM  180
GMAVMLDEII NYVQSLQNQV EFLSMKLTAA STFQDFNSDI DVLETMQRAK AFEALKVQNV  240
ISPQFGQFGP NFGCHPQLPH SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.12e-58bHLH family protein