PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04793.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 746aa MW: 85736.8 Da PI: 7.3382

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.1	2.2e-26	30	116	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +gkw+++++++eHnHel p PIN04793.1 30 EYYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGKWYIHSFVKEHNHELLP 116 69*************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence
MEASSSSMVA NSDLEPRDEM EFDTHEAAYE YYKEYAKSVG FGTAKLSSRR SRASKEFIDA 60 KFSCIRYGNK QQSDDAINPR PSPKIGCKAS MHVKRRPNGK WYIHSFVKEH NHELLPAQVH 120 FFRSHRNANS VNNDAKVRKK KVMASAMKQY GAYQFSGSCI ENVIRNQHDR GRFLGLEEGG 180 AQAVLEFCAN MHEENPKFFY ALDFNEEHQL RNVLWVDAKG VEDFTYFGDV VSFDTTYFAS 240 KYRIPLVLFI GVNHHIQPTL LGCGLVAVET LYTFVWLMQS WCLAMGGRTP KVLLTDQNEA 300 IKAAVPLVFP DTCHFFNLWN VLEKIPRRLD YLSIWHDTFM GKLNKCIYKS WKEEQFEKRW 360 WKLIERFNLQ EDEWIQALYE DRKLWVPAFM KEVSFAGLCA ASRSESLNSF FDRYIHSETS 420 LRDLIGQYKS VLEDRYEEEA KANFDAWHET PDLKSPSPFE KQMLLVYTHE IFKKFQMEVL 480 GAAACHLKKE KEEGSTVFYG VKDFENNQDF VVEWNEQKSD IYCSCHSFQY KGYLCRHAIV 540 VLQMSGVFSI PFKYILQRWT NAATSRIPLS EKLDEVQAKV RRYNDLCRRA IILGEEGSLS 600 QESYITAVGA INEALKQCLD ITKPPENDLR PEISAPLAIQ GVPAANHDVS ITSAQLLPMS 660 KMTNMNKGSK RKEPASHGGI TSKKGKVPLE PQIANMGNQG IFQHMDMPGH MDYPALYPRF 720 LTTLLKGGDM SKRSVEMLGE MLEEQS

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence

MEASSSSMVA NSDLEPRDEM EFDTHEAAYE YYKEYAKSVG FGTAKLSSRR SRASKEFIDA  60
KFSCIRYGNK QQSDDAINPR PSPKIGCKAS MHVKRRPNGK WYIHSFVKEH NHELLPAQVH  120
FFRSHRNANS VNNDAKVRKK KVMASAMKQY GAYQFSGSCI ENVIRNQHDR GRFLGLEEGG  180
AQAVLEFCAN MHEENPKFFY ALDFNEEHQL RNVLWVDAKG VEDFTYFGDV VSFDTTYFAS  240
KYRIPLVLFI GVNHHIQPTL LGCGLVAVET LYTFVWLMQS WCLAMGGRTP KVLLTDQNEA  300
IKAAVPLVFP DTCHFFNLWN VLEKIPRRLD YLSIWHDTFM GKLNKCIYKS WKEEQFEKRW  360
WKLIERFNLQ EDEWIQALYE DRKLWVPAFM KEVSFAGLCA ASRSESLNSF FDRYIHSETS  420
LRDLIGQYKS VLEDRYEEEA KANFDAWHET PDLKSPSPFE KQMLLVYTHE IFKKFQMEVL  480
GAAACHLKKE KEEGSTVFYG VKDFENNQDF VVEWNEQKSD IYCSCHSFQY KGYLCRHAIV  540
VLQMSGVFSI PFKYILQRWT NAATSRIPLS EKLDEVQAKV RRYNDLCRRA IILGEEGSLS  600
QESYITAVGA INEALKQCLD ITKPPENDLR PEISAPLAIQ GVPAANHDVS ITSAQLLPMS  660
KMTNMNKGSK RKEPASHGGI TSKKGKVPLE PQIANMGNQG IFQHMDMPGH MDYPALYPRF  720
LTTLLKGGDM SKRSVEMLGE MLEEQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein