PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04849.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 194aa    MW: 21922.6 Da    PI: 8.4764
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.43.3e-24143192149
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEE CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvve 49 
                 ++Dgy+WrKYGqK+ ++++ pr+YY+C++a  Cpvkkkv++sa+dp++++
  PIN04849.1 143 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApACPVKKKVQKSATDPSLLV 192
                 58***************************99***************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MERTSAETTL SIDLNTNPMH NASEALKSEP RRNFGSESES NTNNEPDGLI QELNRMRSEN  60
KKLHDLLTIV CKNYTEFMQK QSGDEFLCSR KRKSDEIDNL SNIIGNNSCC CDEWSAAGRP  120
KEIKSNVSRV HVRIDPSDTS LVVKDGYQWR KYGQKVTRDN PSPRAYYKCS FAPACPVKKK  180
VQKSATDPSL LVAT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18994SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.21e-44WRKY family protein