PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04867.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 212aa MW: 23836.6 Da PI: 6.4131

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.1e-05	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H PIN04867.1 70 YRCTFCRREFKSAQALGGHMNVH 92 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MATELGHLHF QQSKQSPTQF VLYFQTSHLM WNNNQMSEND VEDDSWEVRA FEEDTRGNSL 60 LGCTWPPRSY RCTFCRREFK SAQALGGHMN VHRRDRARLH HEAPPVFPAG AQDFVGNGLC 120 LLYSLPNPNA ILIPTAPQMD FKSSDLVNIS STHRFLTDKP RDTAAGIVKG DGVSSLCQSG 180 NTEHDESVKD SGIEEIDLEL RLGRRSPPRP CP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17810.1	1e-37	C2H2 family protein