PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04883.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

DBB

Protein Properties

Length: 279aa MW: 30986.9 Da PI: 7.1555

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.1	1.8e-08	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ ++++ ++ fC+ ++ lC++C + H+ H+ PIN04883.1 4 QCDVCGKEGASVFCTADEAALCKNCDSRVHNAnklaskHS 43 7*****************************7666666665 PP
2	zf-B_box	29.2	1.9e-09	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 e + C+ ++e ++ lfC++++ llC++C +H+ Ht PIN04883.1 54 ESPQCDICQERRALLFCQEDRALLCRECDIPIHRAneHT 92 6789*****************************768876 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MKIQCDVCGK EGASVFCTAD EAALCKNCDS RVHNANKLAS KHSRFSLLNP RAKESPQCDI 60 CQERRALLFC QEDRALLCRE CDIPIHRANE HTKKHNRFLL TGVKISAAAS SYQTAISPTG 120 SKSETEINIS VTNEVNYQPT STANCSESSS NPWRDNEQSQ PMSQQGAEST SSISEYLMET 180 LPGWHVDDLL EPSSHYGLSQ NQVPANRGGN GVRMVCYTSN QPSIGQRIET ILVKNDQCNL 240 FTSSSMFLFI FSLSLVPLPC PFVKSHSRNY IIVHSFKEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	5e-67	DBB family protein