PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05009.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 410aa MW: 44899.1 Da PI: 5.8933

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	3.1e-12	344	388	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++Er RR +i +++ +L++l+P+ k s +++L +Av+YIk+L PIN05009.1 344 SIAERVRRTKISDRMKKLQDLVPNM----EKQTSTSDMLDLAVDYIKDL 388 689*******************7....467*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MNNHQQQEFQ QNMQMGSGLT RYRSAPSSYF SSFLDTPTSD GAGFGAEDFE QLFNPRASSP 60 ETQRIFSRFM NSAGPVQENC SSNLAPLPSQ SQLNSQFLPP TKTEPDSQQP QQQLQRHQSN 120 DYSSASQMVY QSQDSVENSY NKSWGSCNSK PGPHMKMEAA AAATADDDGG GGGGGGGGGG 180 GNYSLIRHSS SPAGLFANIN IENEFGIMRD IETFGGRNNA NAEVSFLTSA SKFKSQMDDR 240 QFDRDRGNDA SYIPGFPVNS WDDSAVLSDN FLKELADDDS KSFSNANVSD DQNNEGGNRP 300 TTMLSHHLSL PKSSAEQSAM EKLLQDSVPC KIRAKRGFAT HPRSIAERVR RTKISDRMKK 360 LQDLVPNMEK QTSTSDMLDL AVDYIKDLHR QVKTLSDNRA KCSCSAKQGS

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MNNHQQQEFQ QNMQMGSGLT RYRSAPSSYF SSFLDTPTSD GAGFGAEDFE QLFNPRASSP  60
ETQRIFSRFM NSAGPVQENC SSNLAPLPSQ SQLNSQFLPP TKTEPDSQQP QQQLQRHQSN  120
DYSSASQMVY QSQDSVENSY NKSWGSCNSK PGPHMKMEAA AAATADDDGG GGGGGGGGGG  180
GNYSLIRHSS SPAGLFANIN IENEFGIMRD IETFGGRNNA NAEVSFLTSA SKFKSQMDDR  240
QFDRDRGNDA SYIPGFPVNS WDDSAVLSDN FLKELADDDS KSFSNANVSD DQNNEGGNRP  300
TTMLSHHLSL PKSSAEQSAM EKLLQDSVPC KIRAKRGFAT HPRSIAERVR RTKISDRMKK  360
LQDLVPNMEK QTSTSDMLDL AVDYIKDLHR QVKTLSDNRA KCSCSAKQGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	5e-64	bHLH family protein