PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05035.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 348aa    MW: 38135.4 Da    PI: 5.2166
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.3e-21173222255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  PIN05035.1 173 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDEAAYKLRG 222
                 59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MAATMDFWSS TPVVDPFRGG ELMEALEPFM KSASSPPNSS SSSNLPYNSC FSSYPSTSTA  60
SSFPTPNGQY FSLSNSSPCS SSSFPYDSYN PSTQFEQSNM FQASAHDYLY GLGQQQSLIG  120
LNQLTPTQIQ DIQAQMVSGP SQAQYQMTQN TRFLGPRPVP MKQVGTPPKP TKLYRGVRQR  180
HWGKWVAEIR LPKNRTRLWL GTFDTAEEAA LAYDEAAYKL RGDFARLNFP HLRQNGSYLG  240
GDLCEYKPLH ASVDAKLQAI CQTLAEGKSI DAKKIKNSRS KKSAAAAAAA VVEEEKNCKI  300
SESDSDGSGG SSPDSGITFL EFADEEEPGW DMGSLPKFPS NEIDWDAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.15e-64ERF family protein