PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05039.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 221aa    MW: 25195.2 Da    PI: 6.3616
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-17138188255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+++AeIrdp+    +  r +lg+++t  +Aa+a++ a+ k++g
  PIN05039.1 138 RFRGVRRRP-WGKYAAEIRDPVR---KgSRLWLGTYDTDVDAARAYDCAAFKMRG 188
                 69*******.**********643...24**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MENPHDHPYC LSLDFIRQHL LDDFTSAESF LDNLNFRFQD VFPEYNPIWS SAEIDSSSSG  60
SGSSSHPNLQ PEFPLWGCLD HDFQPDFFEI EMKPQINSTD GTLSLPPLPP ELFKPDPEYD  120
VNFGSDPLTP GLRVIKRRFR GVRRRPWGKY AAEIRDPVRK GSRLWLGTYD TDVDAARAYD  180
CAAFKMRGTK AILNFPMDAG KSGPPVSAGR KRRREKRAND N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133138RVIKRR
2210214RKRRR
3210216RKRRREK
4210217RKRRREKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.14e-34ERF family protein