PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05084.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YB
Protein Properties Length: 176aa    MW: 18992.3 Da    PI: 6.5282
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.82.3e-5628122195
       NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                 vreqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plk+y+++yre ++
  PIN05084.1  28 VREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKAYVTRYREGDT 122
                 69*****************************************************************************************9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MADGQGAPGS PAAGSHDSGG DQSPRSGVRE QDRFLPIANI SRIMKKALPA NGKIAKDAKE  60
TVQECVSEFI SFITSEASDK CQREKRKTIN GDDLLWAMAT LGFEDYIDPL KAYVTRYREG  120
DTKGSAKGAD GPARKDGVQP NPIPQLVLQG SFSQGMNYGN SQPQAQHMMV QMPSMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.13e-79NF-YB family protein