PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05085.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YB
Protein Properties Length: 165aa    MW: 18386.1 Da    PI: 5.9274
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB180.41.6e-5628120193
       NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                 vreqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plk+y+++yre+
  PIN05085.1  28 VREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKAYVTRYREV 120
                 69*****************************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MADGQGAPGS PAAGSHDSGG DQSPRSGVRE QDRFLPIANI SRIMKKALPA NGKIAKDAKE  60
TVQECVSEFI SFITSEASDK CQREKRKTIN GDDLLWAMAT LGFEDYIDPL KAYVTRYREV  120
IVFSLVGFLS LFIYFYIIIS IFCFFWMNNR ENCFTAAIIG IICCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.16e-63NF-YB family protein