PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05124.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 297aa MW: 33342.7 Da PI: 7.9011

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.4e-14	83	134	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ PIN05124.1 83 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 134 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MALQALSSTE LFNFINMYDS APTPFSCNND SSETSPQDQN IGTCSSMPRL SHPPPQAETS 60 VQGRKKRRRR PKVCKNKEEA ETQRMTHIAV ERNRRKQMNE HLAVLRSLMP ESYVQRGDQA 120 SIVGGAIEFV KELEHILQSL EAKKFALLEG SNKDHNNINN NQNSDENKQF LGSPFAQFFA 180 YPQFSCSHQN QLGNKYTSQS KAAIADIEVT LIETHANIRI LSRRRVRQLS KIVASFHSVF 240 LTILHLNVTT LDSLVLYSIS AKVEEGCQLN SADDIAGAVH HMLRIIEEEA AMLGCQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	70	RKKRRRR
2	65	70	KKRRRR
3	84	95	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-73	bHLH family protein