PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05140.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 352aa    MW: 39445.4 Da    PI: 6.1955
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0002277299123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + Cp C+k+F++   L  H r+H
  PIN05140.1 277 HICPFCNKVFKNGQALGGHKRSH 299
                 68******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MASHSERDKG LKDDHSWTSI DSHSDTEAEE TSFRTRSSRN KRYKKIVENC CSFPNNGSSC  60
VSEIDGQEQE EVAMCLLLLS KDSGNSVVES SDNTSVVLET KSSSIEIGIG KKESVNNIHN  120
QDEIPQVKIG LKDSTAFDDD IAQMENSDSG YFLDECAKAE SDVSVDGLRR YGAFEVRKRK  180
YNSENLESER MMKNGDSICN TSQKKSYECL NCKKTFKSYQ ALGGHRPCHK RSNVCYESRC  240
ESSGNNLDDA TDYRKSSAKN SSRSAEKKVK SKKNKGHICP FCNKVFKNGQ ALGGHKRSHF  300
IGGHERNDNQ SPVVKTEVPD PELRNQEAPD IFDLNLLPPE ANEDDQGQFF SW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177217RKRKYNSENLESERMMKNGDSICNTSQKKSYECLNCKKTFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.13e-31C2H2 family protein