PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05233.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 224aa    MW: 25308.3 Da    PI: 6.5607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37.1e-1774122254
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                 ++ GVr ++ +g++ AeIrd ++    +kr++lg+f t+eeA ka+i  ++++ 
  PIN05233.1  74 KFIGVRMRP-WGKYTAEIRDpFK----KKRVWLGTFRTPEEASKAYISKKNEIQ 122
                 789******.**********662....5*********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEGLTPKTKR IRVSYSDPDA TDSSSDESEK AQKKSKRKVH EIVLQSEQNV EKNMEFDSVS  60
EQSLMGSKKF HKRKFIGVRM RPWGKYTAEI RDPFKKKRVW LGTFRTPEEA SKAYISKKNE  120
IQEELRAKQG FDWVPCEKSL TQDSPSSILE FETSESSNGG GAAAEQEVLG EKKVSENQGN  180
KGVRFGYLCG RQIVDQNGFL LGEFSKVDDL SVCTSEDGVF LTED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13372KKSKRKVHEIVLQSEQNVEKNMEFDSVSEQSLMGSKKFHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-20ERF family protein