PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05240.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 285aa MW: 32185.4 Da PI: 6.0374

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.6e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ ++++ G+g +W t ++++g++R++k+c++rw++yl PIN05240.1 14 RGPWSPEEDAKLKSYIEKNGTGgNWITLPHKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	38.5	2.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T++Ed l+ + G++ W+ Ia+ ++ gRt++++k++w++ PIN05240.1 69 GGFTEDEDNLICSLYINIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDAKLKSYIE KNGTGGNWIT LPHKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEDEDNLIC SLYINIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLFGR 120 PRRNQYPHPP QPVAPPPDFS NPANPLCDEA AQNSLTNISI DMPPIEEKFP YDAPCFPSTL 180 TNLKNTPLVS DFHAISGVLA NDFQGYDEIP EDIMYQMPQK LEVLDSTFSV VDDMVNSSTT 240 TSAVSHESTS WGDMNCPFYP SALSTYEVCQ RKMSQEWEVL LGYSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-80	MYB family protein