PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05248.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 258aa MW: 30017.9 Da PI: 5.241

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.3	5.3e-48	6	135	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +GfrFhPt+eelv++yL++k++g++ ++++vi+ vdiy+++Pw+Lp+ ++++++++w+fF++r++++a+g r+nr tk+gyWkatg+ ev+s+++ PIN05248.1 6 VGFRFHPTEEELVSYYLREKLKGTTPDIDRVIPVVDIYNYNPWELPQlageRCHGDTEQWFFFTPRQEREARGGRPNRLTKEGYWKATGSPGEVYSSQN 104 7*************************99***********9656766666888************************************* PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g kkt+vfy+grap+g+kt+W m+ey++ PIN05248.1 105 QRIGRKKTMVFYEGRAPHGRKTSWKMNEYKV 135 ***************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MNDLGVGFRF HPTEEELVSY YLREKLKGTT PDIDRVIPVV DIYNYNPWEL PQLAGERCHG 60 DTEQWFFFTP RQEREARGGR PNRLTKEGYW KATGSPGEVY SSQNQRIGRK KTMVFYEGRA 120 PHGRKTSWKM NEYKVFDNYD HEHAGADPQV REELSLCRIY RRSKCSRAFD RRPPTEAATG 180 NEEAVHHHRN HADEAIAISN QQINPPEIIN GGVDSSSSVD QNTNPSQSVE GENNWDIATD 240 NEPMWDWEEF YSFNMWDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	9e-80	NAC family protein