PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05296.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YB
Protein Properties Length: 101aa    MW: 11574.5 Da    PI: 8.4616
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB57.24.1e-18185893
       NF-YB  8 lPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93
                +Pi+ v++ + ++l a+a i +dak  +q+c+sefi f+t+  +++ +++   ti++ d+l  +  l f  y+ +l++ l++yr  
  PIN05296.1  1 MPITKVIKTIYRALSAHANIDDDAKYAIQKCISEFIPFITTWDNKQRHQDSSSTITAMDVLSIMNILKFVYYI-KLTLLLNNYRAQ 85
                7********************************************************************9999.59999****975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MPITKVIKTI YRALSAHANI DDDAKYAIQK CISEFIPFIT TWDNKQRHQD SSSTITAMDV  60
LSIMNILKFV YYIKLTLLLN NYRAQDLNIA LCNMGYFCGT S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.21e-20NF-YB family protein