PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05372.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NF-YB

Protein Properties

Length: 173aa MW: 19394.6 Da PI: 4.8394

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	168.2	1e-52	46	141	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimk++lP+nakisk+aket+qecvsefi+fvt+easdkc++ekrkt+ngdd+++al++lGf+dy e lk yl+kyre+egek PIN05372.1 46 KEQDRLLPIANVGRIMKQILPSNAKISKEAKETMQECVSEFIGFVTGEASDKCRKEKRKTVNGDDICFALGSLGFDDYFECLKRYLNKYREFEGEK 141 79********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MVDNNIGPKN SHNVAGLTYT NYAAACGAST GGRSEDHDHD QLSVFKEQDR LLPIANVGRI 60 MKQILPSNAK ISKEAKETMQ ECVSEFIGFV TGEASDKCRK EKRKTVNGDD ICFALGSLGF 120 DDYFECLKRY LNKYREFEGE KANQGKASEF NYEDREECDL GPFSPNLMEE RGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	8e-58	NF-YB family protein