PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05441.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 290aa    MW: 32788 Da    PI: 6.6667
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05441.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.71.3e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd +++ +v+ +G g+W++++++ g++R++k+c++rw +yl
       PIN05441.1 14 RGPWTPEEDAKILAYVATHGIGNWTLVPQKAGLNRCGKSCRLRWTNYL 61
                     89********************************************97 PP
2Myb_DNA-binding50.64.3e-1668110246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +++T eE+e +++++k  G++ W++Ia++++ gRt++++k++w++
       PIN05441.1  68 DNFTHEEEECILELHKTVGSR-WSLIAKRLP-GRTDNDVKNYWNT 110
                      689******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGRPPCCDKA NVKRGPWTPE EDAKILAYVA THGIGNWTLV PQKAGLNRCG KSCRLRWTNY  60
LRPDLKHDNF THEEEECILE LHKTVGSRWS LIAKRLPGRT DNDVKNYWNT KLKKKLIKMG  120
IDPITHKPFS QLFAEYGKIS GFPHRNPFLQ NPTAKQPLWK PENNTRKIEK KHSQFLNEVP  180
FSSSTGIMHF GCGPLHNPCE PSQVQMVSYS PFGCDDSIRI ENQEFIDKFT EEEGGDENGE  240
TGMENLGGVA EKCAFGSGSS AGDGFVEAIL AHDNEMRLQF PEILDEDYGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.14e-78MYB family protein