PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05481.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 359aa MW: 40394.3 Da PI: 9.9602

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05481.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.2	2.8e-15	65	155	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ +++Li+a +l+rg+l++++W+ev++++ + +++r+ +qCk++++ ++k+yk +k + + + st+p+f++l+ PIN05481.1 65 CWSEDATRTLIDAWGHHYLELNRGNLRQKHWQEVADAVnaihaTSPKLRRTDVQCKNRIDTIKKKYKIEKSKVVQSNGRYASTWPHFRSLD 155 7***********************************999999999*******************999999899999****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MTPQQTPSLP LSDTPSPTPS PQHPNSDDDK HAPSSPPSPT KPELSSDPRP PVATRTPVFP 60 SREDCWSEDA TRTLIDAWGH HYLELNRGNL RQKHWQEVAD AVNAIHATSP KLRRTDVQCK 120 NRIDTIKKKY KIEKSKVVQS NGRYASTWPH FRSLDSLIGD SFSKTNNCTA NGPSRNLRRR 180 APHSPETSPP PVRLTHRKVY PDTSNHREKD PVVGHLLEIP WSVPVGPRSK RSGPSSVTER 240 NFSVMAAAAA AMEAEEEDEE DDDQDSGGSS GRPPAVRRKR KAPVDGKGLK RLAEAITRLG 300 EIYVKVEEAK QRQIVELEKQ KMQFAKDLEI QRMKVFMESQ LQLEKLKRAK FSSENNSYL

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MTPQQTPSLP LSDTPSPTPS PQHPNSDDDK HAPSSPPSPT KPELSSDPRP PVATRTPVFP  60
SREDCWSEDA TRTLIDAWGH HYLELNRGNL RQKHWQEVAD AVNAIHATSP KLRRTDVQCK  120
NRIDTIKKKY KIEKSKVVQS NGRYASTWPH FRSLDSLIGD SFSKTNNCTA NGPSRNLRRR  180
APHSPETSPP PVRLTHRKVY PDTSNHREKD PVVGHLLEIP WSVPVGPRSK RSGPSSVTER  240
NFSVMAAAAA AMEAEEEDEE DDDQDSGGSS GRPPAVRRKR KAPVDGKGLK RLAEAITRLG  300
EIYVKVEEAK QRQIVELEKQ KMQFAKDLEI QRMKVFMESQ LQLEKLKRAK FSSENNSYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	1e-34	Trihelix family protein