PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05483.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 445aa MW: 49939.7 Da PI: 5.4174

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.8	3e-06	273	304	3	37
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS- CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskK 37 ++h + Er+RR N +++ Lr+l+P + +++K PIN05483.1 273 TKHFATERNRRVFFNAKYQALRKLIPVP---TKQK 304 79************************98...3333 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MYEESAAFDQ RSLHEDGFSQ SHMPSCTINN NQSFSMEEQS FPQNQEVAVA AAVLEMQLQQ 60 QLNLEMEQCY NNNVNGSEIQ EIVHDSNWQE MGSFNGENQY YHHQNPVDYI TSGHHFSLPE 120 TPYPTTPDLL NMFPLPRCSS SSLMTNASIS FSNTGQKSSG FLASLGLLGE LNLSADHGSS 180 TSAGVVYDPL LPLNLPPQPP FLRELLHSFP NGGYSALGGP RNGSLFSGVG ERDHVNGNLY 240 QNGDVMSFDN GVFEFTAGEM DCINGKNRDE RDTKHFATER NRRVFFNAKY QALRKLIPVP 300 TKQKRHAKER LKRPKTEDES MEGNETKPLG DMNINNPFNG SSLRSSWLHR KSKNTEVDVR 360 IIENEVTVKL VQQKRINCLL FVSKVLDELQ LDLQHVSGGL IGDYYSFLFN SKIWEGSIVY 420 ASAIANKFIE VVDKQYAAIP PTSSY

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MYEESAAFDQ RSLHEDGFSQ SHMPSCTINN NQSFSMEEQS FPQNQEVAVA AAVLEMQLQQ  60
QLNLEMEQCY NNNVNGSEIQ EIVHDSNWQE MGSFNGENQY YHHQNPVDYI TSGHHFSLPE  120
TPYPTTPDLL NMFPLPRCSS SSLMTNASIS FSNTGQKSSG FLASLGLLGE LNLSADHGSS  180
TSAGVVYDPL LPLNLPPQPP FLRELLHSFP NGGYSALGGP RNGSLFSGVG ERDHVNGNLY  240
QNGDVMSFDN GVFEFTAGEM DCINGKNRDE RDTKHFATER NRRVFFNAKY QALRKLIPVP  300
TKQKRHAKER LKRPKTEDES MEGNETKPLG DMNINNPFNG SSLRSSWLHR KSKNTEVDVR  360
IIENEVTVKL VQQKRINCLL FVSKVLDELQ LDLQHVSGGL IGDYYSFLFN SKIWEGSIVY  420
ASAIANKFIE VVDKQYAAIP PTSSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	4e-56	bHLH family protein