PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05490.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 223aa    MW: 25757.1 Da    PI: 4.6471
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.24.6e-212510055128
         NAM  55 ekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektd.Wvmheyrl 128
                  ++w+fF++r++++a+ g r+nr tk+gyWkatg+  ev+s++++ +g kkt+vfy+grap+g+k +   m+ey++
  PIN05490.1  25 AEQWFFFIPRQEREARgGIRPNRLTKEGYWKATGSPGEVYSSQNQRIGSKKTMVFYEGRAPNGRKINsRKMNEYKV 100
                 579*******999987478*********************************************976267999975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MNDLGVGFRF HPTVEELVSY YLRDAEQWFF FIPRQEREAR GGIRPNRLTK EGYWKATGSP  60
GEVYSSQNQR IGSKKTMVFY EGRAPNGRKI NSRKMNEYKV FDNYDHDHGG ADLQVREELS  120
LCRIYRRSKC SRAFDSQPPS EAATGDEVAV HHPQNHADEA ITTNNQQINP PEIIDDGVDS  180
SSSGDQDTNP SQSVENENSW YIATDNEPIW DWEEFYSFTM WDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.17e-48NAC family protein