PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05505.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

DBB

Protein Properties

Length: 236aa MW: 26099.6 Da PI: 5.3365

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.4	2.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ PIN05505.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	26.5	1.4e-08	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + + C+ + +k + +fC +++ l+C+dC + +H+ H PIN05505.1 53 KLPLCDICRDKAAFIFCVEDRALFCKDCDEPIHSAnslaakH 94 6799*****************************655666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL SNKLPLCDIC 60 RDKAAFIFCV EDRALFCKDC DEPIHSANSL AAKHQRYLAT GIRVALSSAC NNTSSKSQTE 120 PRPLTSKSQP SAFETPPPHV SVITPPSWAA TDQLIQFSDY ESAYKKENLE FSELDWLTDI 180 NLLQEGLAAA EVPQLQVSQP ITTSYRSTKC YHTAQKKPRI ETPDDDEEHF TVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	3e-84	DBB family protein