PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05544.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ZF-HD
Protein Properties Length: 251aa    MW: 28062.3 Da    PI: 7.4134
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.71e-3153107358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  k rYkeClkNhA+ +GghavDGCgEf+++ geegt ++l+CaAC+CHRnFHR+e+e
   PIN05544.1  53 KSRYKECLKNHAVGIGGHAVDGCGEFIAA-GEEGTLESLRCAACNCHRNFHRKENE 107
                  679*************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MDVEYEDQEE EQEREIGLGP SYDDSLGNSN STRAVPPTKM PSPVDTVVPA LRKSRYKECL  60
KNHAVGIGGH AVDGCGEFIA AGEEGTLESL RCAACNCHRN FHRKENEPGA ASFAFHQHPQ  120
QQQLLLTHHP HGHFAYRTPS GYLHVAPPQQ QRAALLALPS SSGGGGVAAG SRDEMEDYYS  180
NPSSSAGKKR FRTKFTQEQK DKMLNFAERL GWRIQKQDEE LVQQFCNEEG IKRHVLKVWM  240
HNNKHTLGKK T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.16e-60ZF-HD family protein