PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05704.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 307aa    MW: 33141.3 Da    PI: 8.225
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.5e-13102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G g+W+ I+r   k+Rt+ q+ s+ qky
       PIN05704.1 102 PWTEEEHKLFLIGLQKVGRGDWRGISRNYVKTRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSQCSEAPPA AVDGGGMGSN GGGVGEIMLF GVRVKVDPMR KSVSMNNLSE YEPVNNNSNP  60
DKNDNEVPKA PAEEGGSVGY ASADDAVPQP SNGSRERKRG VPWTEEEHKL FLIGLQKVGR  120
GDWRGISRNY VKTRTPTQVA SHAQKYFLRR SSLNRRRRRS SLFDITTDSV TPMPVEEGKN  180
HQENQAQPAL PPTASLPLPI TSNVNGFSVV PFPVTSGPVL FSMQGGNPME IPAHVQNNSS  240
PMFVCPAPVL PMPTSSTALD LNSKQQIPTE PSPLSLRLSL SSGQDQPSTT RDSSFQMMPS  300
LKMEIVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-53MYB_related family protein