PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05851.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 274aa MW: 31149.8 Da PI: 6.252

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.4e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l +++++G +W++ +++ g+ R++k+c++rw +yl PIN05851.1 14 KGAWSEEEDDKLRAYIQRYGHWNWRLLPKYAGLARCGKSCRLRWVNYL 61 79****************99**********************97 PP
2	Myb_DNA-binding	57.5	3.2e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g++T++E++l++++++qlG++ W+tIa++++ gRt++++k++w+++ PIN05851.1 67 KGNFTKQEEDLIIQLHAQLGNK-WSTIAAKLP-GRTDNEIKNFWHSH 111 79******************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MVRAPFVDSN GIKKGAWSEE EDDKLRAYIQ RYGHWNWRLL PKYAGLARCG KSCRLRWVNY 60 LKPGLKKGNF TKQEEDLIIQ LHAQLGNKWS TIAAKLPGRT DNEIKNFWHS HVDKRSKKNT 120 PAKNIKGQTS YESKPSEITL CKTTPNEASS LDAIKPQHST PSFDAYDPSL LSTKEPQQDC 180 SYLPPLPEED LFYSKFNYGE LSSLDSSDYL SALDWINAND DHMSMSSDYV SQPVQGAFWA 240 DSFSSNVSDS QSEIIGYVSP QEMGGFYDPL LMYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	8e-57	MYB family protein