PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05965.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 440aa MW: 50052.2 Da PI: 6.2027

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.2	7.5e-35	43	133	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d+ ++ ++sws g+sfvv+++ efa+++LpkyFkh+nf+SF+RQLn+YgF+kv+ ++ weF++++F +g+++ll++i+ PIN05965.1 43 FLLKTYEMVDDPLTNAIVSWSPIGTSFVVWNPPEFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPDQ---------WEFANEEFIRGQRHLLKNIH 130 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PIN05965.1 131 RRK 133 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MIVVLEGLTH TRAHTHTHTH ISPKIFGIAM DGSSSSSNSP APFLLKTYEM VDDPLTNAIV 60 SWSPIGTSFV VWNPPEFARD LLPKYFKHNN FSSFIRQLNT YGFRKVDPDQ WEFANEEFIR 120 GQRHLLKNIH RRKPIHSHSA QGNAALLSDP EREGFEREIE KLKQEKIMLH SELERYKQEN 180 RGYEHQLRSL GGTLQIIDQR QRQLVITLSQ LLQKPEYTSG LMQQLESHSK KRRLFVKHHL 240 HDEMMFQENS SPSSLPLLNL EVVEKVDSSL TTWEELIHGI NQIPTGQDST MPLMSPRVVN 300 TEMAASSADS DFDVPPCTPE CCMSASPSRT STYVESPPIS PLCIDLDSGS KPSGVDVNMS 360 PPKTSSVEVV KDQEPVAAND GFWQQFFTET PAKQEEQSER RDLYDTKDSN SNGFADEHKP 420 WWNVDKLMNH AERFAGVGRT

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MIVVLEGLTH TRAHTHTHTH ISPKIFGIAM DGSSSSSNSP APFLLKTYEM VDDPLTNAIV  60
SWSPIGTSFV VWNPPEFARD LLPKYFKHNN FSSFIRQLNT YGFRKVDPDQ WEFANEEFIR  120
GQRHLLKNIH RRKPIHSHSA QGNAALLSDP EREGFEREIE KLKQEKIMLH SELERYKQEN  180
RGYEHQLRSL GGTLQIIDQR QRQLVITLSQ LLQKPEYTSG LMQQLESHSK KRRLFVKHHL  240
HDEMMFQENS SPSSLPLLNL EVVEKVDSSL TTWEELIHGI NQIPTGQDST MPLMSPRVVN  300
TEMAASSADS DFDVPPCTPE CCMSASPSRT STYVESPPIS PLCIDLDSGS KPSGVDVNMS  360
PPKTSSVEVV KDQEPVAAND GFWQQFFTET PAKQEEQSER RDLYDTKDSN SNGFADEHKP  420
WWNVDKLMNH AERFAGVGRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	1e-76	HSF family protein