PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05972.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 226aa    MW: 25541.6 Da    PI: 7.1978
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-2091140255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +grW+AeIrdp+    r kr++lg+++t+eeAa+ +++a+ +++g
  PIN05972.1  91 RFRGVRQRP-WGRWAAEIRDPT----RgKRVWLGTYDTPEEAAAVYDRAAVRIKG 140
                 79*******.**********84....35**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEQIVKFTEH IVTTSKLIPH RGSHSVVRIV LTDADATDSS DDEGSIFSRR VKKHVEEIKF  60
KTPKREGNYH SKHSKKKRWV SPGNDVTHGK RFRGVRQRPW GRWAAEIRDP TRGKRVWLGT  120
YDTPEEAAAV YDRAAVRIKG SDAVTNFPTS VESDSVSCGN DVAFSLTSVL RYGELPPFEG  180
LYYGCADEFG FEVGWPLSLP EIGISRKCFG EPFGEVDFDD FIDDIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-28ERF family protein