PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05979.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 308aa    MW: 34408.7 Da    PI: 9.4585
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86.2e-30155214159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++v+ tYegeHnh+
  PIN05979.1 155 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSIEDQSIVVATYEGEHNHP 214
                 58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEFTSLLNTS LDLNIKPLKF LDSAPTTPKQ EVGKNVTFAQ ERVALMEELN RVSAENKKLT  60
ELLTVMCENY TQLRNQLMEH KSKNLEILEN NPVSRKRKGT ENSSINNNNN NMIGPSESSS  120
SDEDSSKKPR QSEQIKAKIS RVYVRTEASD TSLIVKDGYQ WRKYGQKVTR DNPCPRAYFK  180
CSFAPTCPVK KKVQRSIEDQ SIVVATYEGE HNHPNPSKQE TTTNSGSNRN LTLGTVPCST  240
SLSSSGPTIT LDLTKPKQET SSFKGKPDAP EPFQQYFVEQ MASTLTKDPN FKAALAAAIS  300
GKFLQTEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-91WRKY family protein