PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06025.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C3H
Protein Properties Length: 179aa    MW: 19131.7 Da    PI: 8.5944
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.92.2e-10137163127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 yk++lCrf+  +G C +G+ C+FaHg+
  PIN06025.1 137 YKHRLCRFWGTGGACLFGSECQFAHGK 163
                 9************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MENPRSSKAT KLKSTDDVLS PINMLNFACG RHYSSVFDPY ASDSSDSPSP LMKYLRSADP  60
AALVDSPPVF LTPVKVEEDV IVMDGIPVPK SNKKCTEVKT RLPLTSSSVV GGSAGGLNSI  120
SSGAGARGNG NDNSKSYKHR LCRFWGTGGA CLFGSECQFA HGKEELRPTR SSCKIQLEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.13e-07C3H family protein