PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06045.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 171aa MW: 19570.1 Da PI: 10.0266

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.2	2.5e-17	22	77	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++ ++t++q+++Le+ F n+ + +++ +LA +lg++ rqV +W+qN+Ra+ek+ PIN06045.1 22 KHKKRLTQDQVRILETNFSFNNRLEPDRKSRLALELGVPARQVAIWYQNKRAREKN 77 667889************************************************95 PP
2	HD-ZIP_I/II	101.6	6.8e-33	23	114	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl+++qv++LE++F+ +++Lep+rK++la eLg+ +rqva+W+qn+RAR k++ lE dy+aL+ +++++ ++n+rL+ ev++L++el++ PIN06045.1 23 HKKRLTQDQVRILETNFSFNNRLEPDRKSRLALELGVPARQVAIWYQNKRAREKNQSLEFDYKALQLRLENVLADNARLKGEVQRLKAELSK 114 79**************************************************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MHFNHATMDQ FPYPQSRKHL TKHKKRLTQD QVRILETNFS FNNRLEPDRK SRLALELGVP 60 ARQVAIWYQN KRAREKNQSL EFDYKALQLR LENVLADNAR LKGEVQRLKA ELSKIQGVLN 120 SFISPSSCDE VGNANLISKH DLEREFYASL IGGGGAFGGQ DGYDFFGRSV S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	2e-30	HD-ZIP family protein