PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06059.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 201aa    MW: 22502.9 Da    PI: 9.3628
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3491.1e-15114197190
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 f+k +++s+v++  +l+lp  f+++h   +e++ t++l d + ++ + ++  +k++    l++GW++F  a++L egD++vF+l++  +f
  PIN06059.1 114 FVKLMLRSHVSRGFWLCLPSGFCRAHL--PECDATVVLVDDNEQESDTRFLAEKHG----LSAGWRGFSLAHKLLEGDVLVFQLIEPCKF 197
                 89************************6..57999****************555555....***********************9986666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDISQTKNSS KRSALSSSYK SKLRQGIAWE LKKKLAQERL TALDTKLKHG VSVTMAMPIR  60
RHCPPEAKTN SERHSCADVS TSAMELHSYA DVSASAMERA KEVQRNLSSH FPSFVKLMLR  120
SHVSRGFWLC LPSGFCRAHL PECDATVVLV DDNEQESDTR FLAEKHGLSA GWRGFSLAHK  180
LLEGDVLVFQ LIEPCKFKVI S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-37B3 family protein