PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06066.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YC
Protein Properties Length: 114aa    MW: 12681.6 Da    PI: 8.5019
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC110.97.2e-35191001999
       NF-YC  19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                 h+lPlarikki+k   ++vkmis eaP+++skacelfi elt r+w+ + ++krrt++k d+a+av  tdifdflv+ v +d
  PIN06066.1  19 HSLPLARIKKIMKNsSDEVKMISGEAPIVFSKACELFIEELTKRAWIMTLQAKRRTMQKEDVASAVIDTDIFDFLVNLVSHD 100
                 99***********72578***********************************************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MRQPGAYSKL VSGGKSGPHS LPLARIKKIM KNSSDEVKMI SGEAPIVFSK ACELFIEELT  60
KRAWIMTLQA KRRTMQKEDV ASAVIDTDIF DFLVNLVSHD SANTVRESDQ PQES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.15e-34NF-YC family protein