PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06071.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRAS

Protein Properties

Length: 287aa MW: 31065.2 Da PI: 6.2246

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	189.9	1.7e-58	88	260	3	181
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 lLl+cAe+v+ ++l a +lL ++ el+sp g++ qR+ ayf+ AL+ar+ s + y+ l+p ++s ++++ l+al++++ ++P++kfsh+taNqa PIN06071.1 88 GLLLQCAECVAVDNLDDAGQLLPEIAELSSPFGSSAQRVGAYFADALSARVITSYLGAYSPLNPISKS--HHQKLLNALQIYNSITPLIKFSHFTANQA 184 58*******************************************************999887776..69999******************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl 181 I +a++g+++vH+iD+di+qGlQWp L++ Las++++ s+RiTg+g+ s+e l++tg+rLa+fA++l +pf+f++l PIN06071.1 185 IQQALDGADHVHVIDLDIMQGLQWPGLFHILASKTRKIKSFRITGLGP----SAELLHSTGQRLAEFANALSIPFQFQPL 260 ********************************************....9***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MLHPLLHNHP TTTNNSSSAT MASAGKRPVD LSAATTSDPI KRRRSHLSPG KDPQLEEEEV 60 EEAAQFHPAA SSAAQEDDAD STGLRLLGLL LQCAECVAVD NLDDAGQLLP EIAELSSPFG 120 SSAQRVGAYF ADALSARVIT SYLGAYSPLN PISKSHHQKL LNALQIYNSI TPLIKFSHFT 180 ANQAIQQALD GADHVHVIDL DIMQGLQWPG LFHILASKTR KIKSFRITGL GPSAELLHST 240 GQRLAEFANA LSIPFQFQPL EGKIGFEPWW EFSRPVCGGI ALIFSIV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	41	46	KRRRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41920.1	2e-76	GRAS family protein