PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06179.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 293aa    MW: 32626.6 Da    PI: 6.2539
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.63e-182875148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lvd++++ G g+W++ ++  g+ R++k+c++rw +yl
       PIN06179.1 28 KGPWTPEEDQKLVDYINKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 75
                     79******************************99************97 PP
2Myb_DNA-binding49.21.2e-1581126148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
       PIN06179.1  81 RGPFSPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 126
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MQSFEGSPLN AFFSDSSVSS CCVKGLKKGP WTPEEDQKLV DYINKNGHGS WRSLPKLAGL  60
LRCGKSCRLR WTNYLRPDIK RGPFSPEEEK LVIQLHGILG NRWAAIASQL PGRTDNEIKN  120
LWNTHLKKRL LQMGIDPQTH EPSSTSNGSL NRPPSSPSTR HMAQWESARL EAEARLSKES  180
LSLIPSKLEG DFFLRLWNTE VGETFRNLNK QENVASESPM SSSSTKCGAV SGTTTETGLI  240
LSNQHDESRS CIEDEMEDSS DSALQLLLDF PGNNDMSFLG QPDCYSLYPA VFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-109MYB family protein