PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06228.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family FAR1
Protein Properties Length: 220aa    MW: 24728.9 Da    PI: 6.0632
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR178.11.7e-2456145190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY++YA++vGF v++ + ++s+ +g++   ++ C+++g++ + k k+   +++r++ r gC a++  k+ek+gkw+vtk+++eHnH+l+
  PIN06228.1  56 RFYSDYARRVGFVVCIMQRRRSDIDGRTLACRLGCNEQGFSPNMKGKKGPGKESRPSARGGCSATILFKLEKSGKWVVTKFVEEHNHPLV 145
                 5******************************************99999****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MVEGNDVELV RSGLNSDDLE EDDVFEAEDN GRTVEGGGVL KPSVGMEFKS EDDARRFYSD  60
YARRVGFVVC IMQRRRSDID GRTLACRLGC NEQGFSPNMK GKKGPGKESR PSARGGCSAT  120
ILFKLEKSGK WVVTKFVEEH NHPLVVTAHE HTNLLDKDKK IQELTRELQR QEELSAAYRE  180
RLVNLLDNIE NQAEHLSSKV LVVVQNMKKA EAETLTFSKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.13e-53FAR1 family protein