PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06233.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 432aa MW: 48799.6 Da PI: 7.0307

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06233.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.6	4.1e-12	265	308	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er+RR+ri+++++ Lr l+Pk + K++ a++L A eYIk+L+ PIN06233.1 265 VTERNRRKRIKDGMFALRALVPKiS------KMDRASTLGDAAEYIKELE 308 67*******************66......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MAALEAGLDW LRPLINTNPW DFCVIWKLGD DPSRFIEWVT CCCSGGNKAE IIKTTDEDDL 60 ERHLIVECKD KFVKHPVRTK ACKKVAELPS VIPLYSGIHG DVVISEQPRW TSDYEPNGTQ 120 VLVPVTGGLI ELFSTQNVPK DQKIIDYISA RFRVSFKKEN MHNLEDQLCD PHSNDYWPTL 180 VHNLNFLPHL SQPNNYSSFE GSSTCSSLSN EHQILKLDSD HKPSSNPRLK RKKNTDFALV 240 SGNEKAGVKI RQKAEKGPYK SKNLVTERNR RKRIKDGMFA LRALVPKISK MDRASTLGDA 300 AEYIKELEET IENYRQELRA MEEEDYDRVN GKPDVTKLIT DNKSDVDEKT STEVQVEVSQ 360 LGPKGFLLRL ICHKKRGGFS RLMEAMDSLG LQVTDANVTT LNGSVLNVLK VEAGTMQIEP 420 NTLKDSLIQL AN

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MAALEAGLDW LRPLINTNPW DFCVIWKLGD DPSRFIEWVT CCCSGGNKAE IIKTTDEDDL  60
ERHLIVECKD KFVKHPVRTK ACKKVAELPS VIPLYSGIHG DVVISEQPRW TSDYEPNGTQ  120
VLVPVTGGLI ELFSTQNVPK DQKIIDYISA RFRVSFKKEN MHNLEDQLCD PHSNDYWPTL  180
VHNLNFLPHL SQPNNYSSFE GSSTCSSLSN EHQILKLDSD HKPSSNPRLK RKKNTDFALV  240
SGNEKAGVKI RQKAEKGPYK SKNLVTERNR RKRIKDGMFA LRALVPKISK MDRASTLGDA  300
AEYIKELEET IENYRQELRA MEEEDYDRVN GKPDVTKLIT DNKSDVDEKT STEVQVEVSQ  360
LGPKGFLLRL ICHKKRGGFS RLMEAMDSLG LQVTDANVTT LNGSVLNVLK VEAGTMQIEP  420
NTLKDSLIQL AN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	7e-72	bHLH family protein