PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06242.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 91aa    MW: 10412.6 Da    PI: 7.6724
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding353.3e-111356344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+ E + + +a +++ ++   +W+ +ar +g gRt++++k ++
       PIN06242.1 13 PWTAKENKDFEKALAMYDKDtpdRWANVARAVG-GRTEEEVKRHY 56
                     8********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MASSSMARGS GSPWTAKENK DFEKALAMYD KDTPDRWANV ARAVGGRTEE EVKRHYEILV  60
EDVKHIESGK VPLPNYRTTS GSMRNEEQRY Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.17e-36MYB_related family protein